5AXI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, CL, PTR enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, B, A


Primary referenceStructural analysis of the TKB domain of ubiquitin ligase Cbl-b complexed with its small inhibitory peptide, Cblin., Ohno A, Ochi A, Maita N, Ueji T, Bando A, Nakao R, Hirasaka K, Abe T, Teshima-Kondo S, Nemoto H, Okumura Y, Higashibata A, Yano S, Tochio H, Nikawa T, Arch Biochem Biophys. 2016 Feb 10;594:1-7. doi: 10.1016/j.abb.2016.02.014. PMID:26874193
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (158 Kb) [Save to disk]
  • Biological Unit Coordinates (5axi.pdb1.gz) 54 Kb
  • Biological Unit Coordinates (5axi.pdb2.gz) 54 Kb
  • Biological Unit Coordinates (5axi.pdb3.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 5AXI
  • CSU: Contacts of Structural Units for 5AXI
  • Structure Factors (649 Kb)
  • Retrieve 5AXI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5AXI from S2C, [Save to disk]
  • Re-refined 5axi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5AXI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5axi] [5axi_A] [5axi_B] [5axi_C] [5axi_E]
  • SWISS-PROT database:

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