5C8D		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	5AD, B12	enzyme
Gene	TT
Gene Ontology	Chain Function Process Component A, E, F, G, B, H, D, C
Primary reference	Structural basis for gene regulation by a B-dependent photoreceptor., Jost M, Fernandez-Zapata J, Polanco MC, Ortiz-Guerrero JM, Chen PY, Kang G, Padmanabhan S, Elias-Arnanz M, Drennan CL, Nature. 2015 Sep 28. doi: 10.1038/nature14950. PMID:26416754

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (658 Kb) [Save to disk] Biological Unit Coordinates (5c8d.pdb1.gz) 301 Kb Biological Unit Coordinates (5c8d.pdb2.gz) 346 Kb LPC: Ligand-Protein Contacts for 5C8D CSU: Contacts of Structural Units for 5C8D Structure Factors (530 Kb) Retrieve 5C8D in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5C8D from S2C, [Save to disk] Re-refined 5c8d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5C8D in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5c8d] [5c8d_A] [5c8d_B] [5c8d_C] [5c8d_D] [5c8d_E] [5c8d_F] [5c8d_G] [5c8d_H] SWISS-PROT database: Domain found in 5C8D: [HTH_MERR ] by SMART

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