5C8F date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand B12, CL, GOL enzyme
Gene TT
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for gene regulation by a B-dependent photoreceptor., Jost M, Fernandez-Zapata J, Polanco MC, Ortiz-Guerrero JM, Chen PY, Kang G, Padmanabhan S, Elias-Arnanz M, Drennan CL, Nature. 2015 Sep 28. doi: 10.1038/nature14950. PMID:26416754
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk]
  • Biological Unit Coordinates (5c8f.pdb1.gz) 93 Kb
  • Biological Unit Coordinates (5c8f.pdb2.gz) 366 Kb
  • LPC: Ligand-Protein Contacts for 5C8F
  • CSU: Contacts of Structural Units for 5C8F
  • Structure Factors (157 Kb)
  • Retrieve 5C8F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5C8F from S2C, [Save to disk]
  • Re-refined 5c8f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5C8F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5c8f] [5c8f_A]
  • SWISS-PROT database:
  • Domain found in 5C8F: [HTH_MERR ] by SMART

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