5D0A date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand B12, GOL, PO4, SF4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, A, B, C


Primary referenceMolecular basis of cobalamin-dependent RNA modification., Dowling DP, Miles ZD, Kohrer C, Maiocco SJ, Elliott SJ, Bandarian V, Drennan CL, Nucleic Acids Res. 2016 Sep 15. pii: gkw806. PMID:27638883
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (282 Kb) [Save to disk]
  • Biological Unit Coordinates (5d0a.pdb1.gz) 74 Kb
  • Biological Unit Coordinates (5d0a.pdb2.gz) 74 Kb
  • Biological Unit Coordinates (5d0a.pdb3.gz) 69 Kb
  • Biological Unit Coordinates (5d0a.pdb4.gz) 69 Kb
  • LPC: Ligand-Protein Contacts for 5D0A
  • CSU: Contacts of Structural Units for 5D0A
  • Structure Factors (1145 Kb)
  • Retrieve 5D0A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5D0A from S2C, [Save to disk]
  • Re-refined 5d0a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5D0A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5d0a] [5d0a_A] [5d0a_B] [5d0a_C] [5d0a_D] [5d0a_E] [5d0a_F]
  • SWISS-PROT database:
  • Domain found in 5D0A: [EZ_HEAT ] by SMART

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