5D0G date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, GTP enzyme
Gene O972
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceSubstrate specificity determinants of class III nucleotidyl cyclases., Bharambe NG, Barathy DV, Syed W, Visweswariah SS, Colavarsigmao M, Misquith S, Suguna K, FEBS J. 2016 Aug 20. doi: 10.1111/febs.13837. PMID:27542992
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (150 Kb) [Save to disk]
  • Biological Unit Coordinates (5d0g.pdb1.gz) 143 Kb
  • LPC: Ligand-Protein Contacts for 5D0G
  • CSU: Contacts of Structural Units for 5D0G
  • Structure Factors (2114 Kb)
  • Retrieve 5D0G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5D0G from S2C, [Save to disk]
  • Re-refined 5d0g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5D0G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5d0g] [5d0g_A] [5d0g_B]
  • SWISS-PROT database:
  • Domain found in 5D0G: [CYCc ] by SMART

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