5D61		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CA, CF0, CL, DMS, EDO, FUC, GAL, GLA, NA, PHQ	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	An Unusual Member of the Papain Superfamily: Mapping the Catalytic Cleft of the Marasmius oreades agglutinin (MOA) with a Caspase Inhibitor., Cordara G, van Eerde A, Grahn EM, Winter HC, Goldstein IJ, Krengel U, PLoS One. 2016 Feb 22;11(2):e0149407. doi: 10.1371/journal.pone.0149407., eCollection 2016. PMID:26901797

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk] Biological Unit Coordinates (5d61.pdb1.gz) 109 Kb LPC: Ligand-Protein Contacts for 5D61 CSU: Contacts of Structural Units for 5D61 Structure Factors (1021 Kb) Retrieve 5D61 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5D61 from S2C, [Save to disk] Re-refined 5d61 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5D61 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5d61] [5d61_A] [5d61_L] SWISS-PROT database:

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