5D6D date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, FUC, FUL, GAL, MAN, NAG enzyme
Primary referenceStructural characterization of GASDALIE Fc bound to the activating Fc receptor FcgammaRIIIa., Ahmed AA, Keremane SR, Vielmetter J, Bjorkman PJ, J Struct Biol. 2016 Apr;194(1):78-89. doi: 10.1016/j.jsb.2016.02.001. Epub 2016, Feb 2. PMID:26850169
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (105 Kb) [Save to disk]
  • Biological Unit Coordinates (5d6d.pdb1.gz) 96 Kb
  • LPC: Ligand-Protein Contacts for 5D6D
  • CSU: Contacts of Structural Units for 5D6D
  • Structure Factors (741 Kb)
  • Retrieve 5D6D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5D6D from S2C, [Save to disk]
  • Re-refined 5d6d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5D6D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5d6d] [5d6d_A] [5d6d_B] [5d6d_C]
  • SWISS-PROT database:
  • Domains found in 5D6D: [IG] [IG_like] [IGc1 ] by SMART

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