5D8G date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, CL, CME, EPE, MG, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA structural view of the dissociation of Escherichia coli tryptophanase., Green K, Qasim N, Gdaelvsky G, Kogan A, Goldgur Y, Parola AH, Lotan O, Almog O, Acta Crystallogr D Biol Crystallogr. 2015 Dec 1;71(Pt 12):2364-71. doi:, 10.1107/S139900471501799X. Epub 2015 Nov 26. PMID:26627645
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk]
  • Biological Unit Coordinates (5d8g.pdb1.gz) 329 Kb
  • LPC: Ligand-Protein Contacts for 5D8G
  • CSU: Contacts of Structural Units for 5D8G
  • Structure Factors (900 Kb)
  • Retrieve 5D8G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5D8G from S2C, [Save to disk]
  • Re-refined 5d8g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5D8G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5d8g] [5d8g_A]
  • SWISS-PROT database:

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