5D8P date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ACT, FE2, HEM, K enzyme
Gene
Ontology
ChainFunctionProcessComponent
H, B, A, D, G, C, J, E, F, L, I, K


Primary referenceCharacterization of the Bacterioferritin/Bacterioferritin Associated Ferredoxin (BfrB:Bfd) Protein-Protein Interaction in Solution and Determination of Binding Energy Hot Spots., Wang Y, Yao H, Cheng Y, Lovell SW, Battaile KP, Middaugh CR, Rivera M, Biochemistry. 2015 Sep 28. PMID:26368531
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (335 Kb) [Save to disk]
  • Biological Unit Coordinates (5d8p.pdb1.gz) 631 Kb
  • LPC: Ligand-Protein Contacts for 5D8P
  • CSU: Contacts of Structural Units for 5D8P
  • Structure Factors (6063 Kb)
  • Retrieve 5D8P in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5D8P from S2C, [Save to disk]
  • Re-refined 5d8p structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5D8P in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5d8p] [5d8p_A] [5d8p_B] [5d8p_C] [5d8p_D] [5d8p_E] [5d8p_F] [5d8p_G] [5d8p_H] [5d8p_I] [5d8p_J] [5d8p_K] [5d8p_L]
  • SWISS-PROT database:

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