5DBK date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceHow Quorum Sensing Connects Sporulation to Necrotrophism in Bacillus thuringiensis., Perchat S, Talagas A, Poncet S, Lazar N, Li de la Sierra-Gallay I, Gohar M, Lereclus D, Nessler S, PLoS Pathog. 2016 Aug 2;12(8):e1005779. doi: 10.1371/journal.ppat.1005779., eCollection 2016 Aug. PMID:27483473
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (121 Kb) [Save to disk]
  • Biological Unit Coordinates (5dbk.pdb1.gz) 116 Kb
  • CSU: Contacts of Structural Units for 5DBK
  • Structure Factors (169 Kb)
  • Retrieve 5DBK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DBK from S2C, [Save to disk]
  • Re-refined 5dbk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5DBK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dbk] [5dbk_A] [5dbk_B]
  • SWISS-PROT database:
  • Domain found in 5DBK: [TPR ] by SMART

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