5DEX date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5E0, GLY enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural basis of subunit selectivity for competitive NMDA receptor antagonists with preference for GluN2A over GluN2B subunits., Lind GE, Mou TC, Tamborini L, Pomper MG, De Micheli C, Conti P, Pinto A, Hansen KB, Proc Natl Acad Sci U S A. 2017 Aug 15;114(33):E6942-E6951. doi:, 10.1073/pnas.1707752114. Epub 2017 Jul 31. PMID:28760974
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk]
  • Biological Unit Coordinates (5dex.pdb1.gz) 91 Kb
  • LPC: Ligand-Protein Contacts for 5DEX
  • CSU: Contacts of Structural Units for 5DEX
  • Structure Factors (346 Kb)
  • Retrieve 5DEX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DEX from S2C, [Save to disk]
  • Re-refined 5dex structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5DEX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dex] [5dex_A] [5dex_B]
  • SWISS-PROT database:
  • Domains found in 5DEX: [Lig_chan-Glu_bd] [PBPb] [PBPe ] by SMART

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science