5DFW date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceVH-VL orientation prediction for antibody humanization candidate selection: A case study., Bujotzek A, Lipsmeier F, Harris SF, Benz J, Kuglstatter A, Georges G, MAbs. 2015 Dec 4:0. PMID:26637054
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (5dfw.pdb1.gz) 99 Kb
  • CSU: Contacts of Structural Units for 5DFW
  • Structure Factors (371 Kb)
  • Retrieve 5DFW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DFW from S2C, [Save to disk]
  • Re-refined 5dfw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5DFW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dfw] [5dfw_A] [5dfw_H]
  • SWISS-PROT database:
  • Domain found in 5DFW: [IGv ] by SMART

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science