5DNX date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5LD, MN enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, C, A


Primary referenceMirror-Image Packing Provides a Molecular Basis for the Nanomolar Equipotency of Enantiomers of an Experimental Herbicide., Bisson C, Britton KL, Sedelnikova SE, Rodgers HF, Eadsforth TC, Viner RC, Hawkes TR, Baker PJ, Rice DW, Angew Chem Int Ed Engl. 2016 Oct 17;55(43):13485-13489. doi:, 10.1002/anie.201607185. Epub 2016 Sep 26. PMID:27717128
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (96 Kb) [Save to disk]
  • Biological Unit Coordinates (5dnx.pdb1.gz) 710 Kb
  • LPC: Ligand-Protein Contacts for 5DNX
  • CSU: Contacts of Structural Units for 5DNX
  • Structure Factors (3699 Kb)
  • Retrieve 5DNX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5DNX from S2C, [Save to disk]
  • Re-refined 5dnx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5DNX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dnx] [5dnx_A] [5dnx_B] [5dnx_C]
  • SWISS-PROT database:

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