5DUR date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, A


Primary referenceComprehensive analysis of antibody recognition in convalescent humans from highly pathogenic avian influenza H5N1 infection., Zuo T, Sun J, Wang G, Jiang L, Zuo Y, Li D, Shi X, Liu X, Fan S, Ren H, Hu H, Sun L, Zhou B, Liang M, Zhou P, Wang X, Zhang L, Nat Commun. 2015 Dec 4;6:8855. doi: 10.1038/ncomms9855. PMID:26635249
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (410 Kb) [Save to disk]
  • Biological Unit Coordinates (5dur.pdb1.gz) 403 Kb
  • LPC: Ligand-Protein Contacts for 5DUR
  • CSU: Contacts of Structural Units for 5DUR
  • Structure Factors (679 Kb)
  • Retrieve 5DUR in mmCIF format [Save to disk]
  • Re-refined 5dur structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5DUR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5dur] [5dur_A] [5dur_B] [5dur_C] [5dur_D] [5dur_H] [5dur_L]
  • SWISS-PROT database:
  • Domains found in 5DUR: [IG_like] [IGv ] by SMART

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