5FI9 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, FUC, MAN, NAG, NT8, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceCrystal structure of mammalian acid sphingomyelinase., Gorelik A, Illes K, Heinz LX, Superti-Furga G, Nagar B, Nat Commun. 2016 Jul 20;7:12196. doi: 10.1038/ncomms12196. PMID:27435900
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (341 Kb) [Save to disk]
  • Biological Unit Coordinates (5fi9.pdb1.gz) 167 Kb
  • Biological Unit Coordinates (5fi9.pdb2.gz) 167 Kb
  • LPC: Ligand-Protein Contacts for 5FI9
  • CSU: Contacts of Structural Units for 5FI9
  • Structure Factors (281 Kb)
  • Retrieve 5FI9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5FI9 from S2C, [Save to disk]
  • Re-refined 5fi9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5FI9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5fi9] [5fi9_A] [5fi9_B]
  • SWISS-PROT database:
  • Domain found in 5FI9: [SapB ] by SMART

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