5FM1	Cell Cycle	date	Oct 30, 2015
title	Structure Of Gamma-Tubulin Small Complex Based On A Cryo-Em Chemical Cross-Links, And A Remotely Related Structure
authors	C.H.Greenberg, J.Kollman, A.Zelter, R.Johnson, M.J.Maccoss, T.N.D D.A.Agard, A.Sali
compound		source
Molecule: Spindle Pole Body Component Spc97 Chain: A Synonym: Gcp2 Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pdv45
Molecule: Spindle Pole Body Component Spc98 Chain: B Synonym: Gcp3 Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pdv45
Molecule: Tubulin Gamma Chain Chain: C, D Synonym: Gamma-Tubulin Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pdv45
Molecule: Spindle Pole Body Component 110 Chain: E, F Synonym: Extragenic Suppressor Of Cmd1-1 Mutant Protein 1, Filament-Related Protein 1, Spindle Pole Body Spacer Protei Spc110; Engineered: Yes Other_details: Construct Includes The First 220 Residues Of It Cannot Be Uniquely Identified Which Fragment Of Spc110 I In The Map, Thus A Poly-Alanine Helix Was Fitted.		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pdv45
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	Electron Microscopy	resolution	8.00 Å
Gene Ontology	Chain Function Process Component A B D, C
Primary reference	Structure of gamma-tubulin small complex based on a cryo-EM map, chemical cross-links, and a remotely related structure., Greenberg CH, Kollman J, Zelter A, Johnson R, MacCoss MJ, Davis TN, Agard DA, Sali A, J Struct Biol. 2016 Jun;194(3):303-10. doi: 10.1016/j.jsb.2016.03.006. Epub 2016 , Mar 8. PMID:26968363

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2887 Kb) [Save to disk] Biological Unit Coordinates (5fm1.pdb1.gz) 2010 Kb CSU: Contacts of Structural Units for 5FM1 Retrieve 5FM1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5FM1 from S2C, [Save to disk]

View 5FM1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5FM1

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5fm1] [5fm1_E] [5fm1_D] [5fm1_B] [5fm1_C] [5fm1_A] [5fm1_F] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 5FM1: [Tubulin] [Tubulin_C ] by SMART

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