5FO7	Lipid Binding	date	Nov 18, 2015
title	Crystal Structure Of Human Complement C3b At 2.8 Angstrom Re
authors	F.Forneris, J.Wu, X.Xue, P.Gros
compound		source
Molecule: Complement C3 Beta Chain Chain: A Fragment: Residues 23-667 Synonym: C3 And Pzp-Like Alpha-2-Macroglobulin Domain-Conta Protein 1;		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Other_details: Purified From Human Plasma
Molecule: Complement C3b Alpha' Chain Chain: B Fragment: Residues 749-1663 Synonym: C3 And Pzp-Like Alpha-2-Macroglobulin Domain-Conta Protein 1		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Other_details: Purified From Human Plasma
symmetry	Space Group: P 1 21 1	R_factor 0.229 R_Free 0.268
crystal cell	length a length b length c angle alpha angle beta angle gamma 57.580 136.510 140.930 90.00 96.05 90.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	NAG	enzyme
Gene Ontology	Chain Function Process Component A B
Primary reference	Regulators of complement activity mediate inhibitory mechanisms through a common C3b-binding mode., Forneris F, Wu J, Xue X, Ricklin D, Lin Z, Sfyroera G, Tzekou A, Volokhina E, Granneman JC, Hauhart R, Bertram P, Liszewski MK, Atkinson JP, Lambris JD, Gros P, EMBO J. 2016 Mar 24. pii: e201593673. PMID:27013439

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (523 Kb) [Save to disk] Biological Unit Coordinates (5fo7.pdb1.gz) 515 Kb LPC: Ligand-Protein Contacts for 5FO7 CSU: Contacts of Structural Units for 5FO7 Structure Factors (925 Kb) Retrieve 5FO7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5FO7 from S2C, [Save to disk] Re-refined 5fo7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5FO7 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5FO7

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5fo7_A] [5fo7] [5fo7_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 5FO7: [A2M] [A2M_N_2] [A2M_recep] [C345C] [Thiol-ester_cl ] by SMART

Other resources with information on 5FO7

Community annotation for 5FO7 at PDBWiki (http://pdbwiki.org)

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