5FOE date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EDO, GDP, NAG enzyme
Primary referenceA proactive role of water molecules in acceptor recognition by protein O-fucosyltransferase 2., Valero-Gonzalez J, Leonhard-Melief C, Lira-Navarrete E, Jimenez-Oses G, Hernandez-Ruiz C, Pallares MC, Yruela I, Vasudevan D, Lostao A, Corzana F, Takeuchi H, Haltiwanger RS, Hurtado-Guerrero R, Nat Chem Biol. 2016 Feb 8. doi: 10.1038/nchembio.2019. PMID:26854667
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (306 Kb) [Save to disk]
  • Biological Unit Coordinates (5foe.pdb1.gz) 150 Kb
  • Biological Unit Coordinates (5foe.pdb2.gz) 152 Kb
  • LPC: Ligand-Protein Contacts for 5FOE
  • CSU: Contacts of Structural Units for 5FOE
  • Structure Factors (3603 Kb)
  • Retrieve 5FOE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5FOE from S2C, [Save to disk]
  • Re-refined 5foe structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5FOE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5foe] [5foe_A] [5foe_B]
  • SWISS-PROT database:
  • Domain found in 5FOE: [TSP1 ] by SMART

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