OCA Atlas for 5FUC

5FUC

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

NAG

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, A		regulation of vascular endot... positive regulation of chemo... positive regulation of trans... positive regulation of immun...
D, C

Primary reference

Discovery of a junctional epitope antibody that stabilizes IL-6 and gp80 protein:protein interaction and modulates its downstream signaling., Adams R, Burnley RJ, Valenzano CR, Qureshi O, Doyle C, Lumb S, Del Carmen Lopez M, Griffin R, McMillan D, Taylor RD, Meier C, Mori P, Griffin LM, Wernery U, Kinne J, Rapecki S, Baker TS, Lawson AD, Wright M, Ettorre A, Sci Rep. 2017 Jan 30;7:37716. doi: 10.1038/srep37716. PMID:28134246

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (159 Kb) [Save to disk]

Biological Unit Coordinates (5fuc.pdb1.gz) 78 Kb

Biological Unit Coordinates (5fuc.pdb2.gz) 79 Kb

LPC: Ligand-Protein Contacts for 5FUC

CSU: Contacts of Structural Units for 5FUC

Structure Factors (211 Kb)

Retrieve 5FUC in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5FUC from S2C, [Save to disk]

Re-refined 5fuc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5FUC in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5fuc_C] [5fuc_D] [5fuc_E] [5fuc_V] [5fuc] [5fuc_A] [5fuc_B]

SWISS-PROT database:

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