OCA Atlas for 5GM4

5GM4

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

BGC, SO4

enzyme

Gene
Ontology

Chain	Function	Process	Component
E, C, D, A, G, F, B

Primary reference

Crystal structure and genetic modifications of FI-CMCase from Aspergillus aculeatus F-50., Huang JW, Liu W, Lai HL, Cheng YS, Zheng Y, Li Q, Sun H, Kuo CJ, Guo RT, Chen CC, Biochem Biophys Res Commun. 2016 Sep 16;478(2):565-72. doi:, 10.1016/j.bbrc.2016.07.101. Epub 2016 Jul 25. PMID:27470581

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (268 Kb) [Save to disk]

Biological Unit Coordinates (5gm4.pdb1.gz) 41 Kb

Biological Unit Coordinates (5gm4.pdb2.gz) 41 Kb

Biological Unit Coordinates (5gm4.pdb3.gz) 41 Kb

Biological Unit Coordinates (5gm4.pdb4.gz) 40 Kb

Biological Unit Coordinates (5gm4.pdb5.gz) 41 Kb

Biological Unit Coordinates (5gm4.pdb6.gz) 41 Kb

Biological Unit Coordinates (5gm4.pdb7.gz) 40 Kb

LPC: Ligand-Protein Contacts for 5GM4

CSU: Contacts of Structural Units for 5GM4

Structure Factors (1417 Kb)

Retrieve 5GM4 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5GM4 from S2C, [Save to disk]

Re-refined 5gm4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5GM4 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5gm4] [5gm4_A] [5gm4_B] [5gm4_C] [5gm4_D] [5gm4_E] [5gm4_F] [5gm4_G]

SWISS-PROT database:

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