5GO5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CME, GLY, SO4 enzyme
Gene SAVERM
Primary referenceStructure and specificity of a new class of Ca(2+)-independent housekeeping sortase from Streptomyces avermitilis provide insights into its non-canonical substrate preference., Das S, Pawale VS, Dadireddy V, Singh AK, Ramakumar S, Roy RP, J Biol Chem. 2017 Apr 28;292(17):7244-7257. doi: 10.1074/jbc.M117.782037. Epub, 2017 Mar 7. PMID:28270507
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk]
  • Biological Unit Coordinates (5go5.pdb1.gz) 28 Kb
  • LPC: Ligand-Protein Contacts for 5GO5
  • CSU: Contacts of Structural Units for 5GO5
  • Structure Factors (1650 Kb)
  • Retrieve 5GO5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GO5 from S2C, [Save to disk]
  • Re-refined 5go5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5GO5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5go5] [5go5_A]
  • SWISS-PROT database:

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