5GUH date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MG, OMU enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • nuclease activity
  • endonuclease activity
  • endoribonuclease activity


    • Primary referenceCrystal Structure of Silkworm PIWI-Clade Argonaute Siwi Bound to piRNA., Matsumoto N, Nishimasu H, Sakakibara K, Nishida KM, Hirano T, Ishitani R, Siomi H, Siomi MC, Nureki O, Cell. 2016 Oct 6;167(2):484-497.e9. doi: 10.1016/j.cell.2016.09.002. Epub 2016, Sep 29. PMID:27693359
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (258 Kb) [Save to disk]
  • Biological Unit Coordinates (5guh.pdb1.gz) 251 Kb
  • LPC: Ligand-Protein Contacts for 5GUH
  • CSU: Contacts of Structural Units for 5GUH
  • Structure Factors (2592 Kb)
  • Retrieve 5GUH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5GUH from S2C, [Save to disk]
  • Re-refined 5guh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5GUH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5guh] [5guh_A] [5guh_B]
  • SWISS-PROT database:
  • Domains found in 5GUH: [PAZ] [Piwi ] by SMART

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