OCA Atlas for 5H1S

5H1S

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
E
F
G
H
I
J
L
M
N
O
P
Q
R
S
T
U
V
W
X
Y
Z
a
b
c
d
e
f
g
h

Primary reference

Cryo-EM structure of the large subunit of the spinach chloroplast ribosome., Ahmed T, Yin Z, Bhushan S, Sci Rep. 2016 Oct 20;6:35793. doi: 10.1038/srep35793. PMID:27762343

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1528 Kb) [Save to disk]

Biological Unit Coordinates (5h1s.pdb1.gz) 1517 Kb

CSU: Contacts of Structural Units for 5H1S

Retrieve 5H1S in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5H1S from S2C, [Save to disk]

View 5H1S in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5h1s_I] [5h1s_J] [5h1s_M] [5h1s_L] [5h1s_N] [5h1s_O] [5h1s_P] [5h1s_Q] [5h1s_R] [5h1s_S] [5h1s_T] [5h1s_U] [5h1s_V] [5h1s_W] [5h1s_X] [5h1s_Y] [5h1s_Z] [5h1s] [5h1s_A] [5h1s_B] [5h1s_C] [5h1s_E] [5h1s_F] [5h1s_G] [5h1s_H] [5h1s_a] [5h1s_b] [5h1s_c] [5h1s_d] [5h1s_e] [5h1s_f] [5h1s_g] [5h1s_h]

SWISS-PROT database:

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