5HC0 Hydrolase date Jan 04, 2016
title Structure Of Esterase Est22 With P-Nitrophenol
authors J.Li, J.Huang
compound source
Molecule: Lipolytic Enzyme
Chain: A
Ec: 3.1.1.-
Engineered: Yes
 Organism_scientific: Uncultured Bacterium
Organism_taxid: 77133
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.132 R_Free 0.158
crystal
cell
length a length b length c angle alpha angle beta angle gamma
121.823 57.220 54.578 90.00 97.46 90.00
method X-Ray Diffractionresolution 1.40 Å
ligand ACY, GOL, NPO enzyme Hydrolase E.C.3.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural insights of a hormone sensitive lipase homologue Est22., Huang J, Huo YY, Ji R, Kuang S, Ji C, Xu XW, Li J, Sci Rep. 2016 Jun 22;6:28550. doi: 10.1038/srep28550. PMID:27328716
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk]
  • Biological Unit Coordinates (5hc0.pdb1.gz) 122 Kb
  • LPC: Ligand-Protein Contacts for 5HC0
  • CSU: Contacts of Structural Units for 5HC0
  • Structure Factors (3430 Kb)
  • Retrieve 5HC0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5HC0 from S2C, [Save to disk]
  • Re-refined 5hc0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5HC0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5HC0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5hc0_A] [5hc0]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5HC0
  • Community annotation for 5HC0 at PDBWiki (http://pdbwiki.org)

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