5HLZ Signaling Protein date Jan 15, 2016
title Structure Of Pro-Activin A Complex At 2.85 A Resolution
authors X.Wang, G.Fischer, M.Hyvonen
compound source
Molecule: Inhibin Beta A Chain
Chain: A, C, E, G
Fragment: Pro Domain, Unp Residues 30-305
Synonym: Activin Beta-A Chain,Erythroid Differentiation Pro
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Inhba
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_vector: Phat2

Molecule: Inhibin Beta A Chain
Chain: B, D, F, H
Fragment: Mature Domain, Unp Residues 311-426
Synonym: Activin Beta-A Chain,Erythroid Differentiation Pro
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Inhba
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_vector: Phat2
symmetry Space Group: P 31
R_factor 0.220 R_Free 0.274
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.227 47.227 445.425 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.85 Å
Gene
Ontology
ChainFunctionProcessComponent
A, E, C, G


F, B, H, D


Primary referenceStructure and activation of pro-activin A., Wang X, Fischer G, Hyvonen M, Nat Commun. 2016 Jul 4;7:12052. doi: 10.1038/ncomms12052. PMID:27373274
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (192 Kb) [Save to disk]
  • Biological Unit Coordinates (5hlz.pdb1.gz) 94 Kb
  • Biological Unit Coordinates (5hlz.pdb2.gz) 94 Kb
  • CSU: Contacts of Structural Units for 5HLZ
  • Structure Factors (543 Kb)
  • Retrieve 5HLZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5HLZ from S2C, [Save to disk]
  • Re-refined 5hlz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5HLZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5HLZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5hlz_G] [5hlz_C] [5hlz] [5hlz_B] [5hlz_D] [5hlz_F] [5hlz_E] [5hlz_A] [5hlz_H]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 5HLZ: [TGFB ] by SMART
  • Other resources with information on 5HLZ
  • Community annotation for 5HLZ at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science