5IRX date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 6EU, 6O8, 6O9, 6OE enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, B, D, A


F, E
  • toxin activity


    • Primary referenceTRPV1 structures in nanodiscs reveal mechanisms of ligand and lipid action., Gao Y, Cao E, Julius D, Cheng Y, Nature. 2016 May 18;534(7607):347-51. doi: 10.1038/nature17964. PMID:27281200
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (252 Kb) [Save to disk]
  • Biological Unit Coordinates (5irx.pdb1.gz) 234 Kb
  • LPC: Ligand-Protein Contacts for 5IRX
  • CSU: Contacts of Structural Units for 5IRX
  • Retrieve 5IRX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5IRX from S2C, [Save to disk]
    • View 5IRX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5irx] [5irx_A] [5irx_B] [5irx_C] [5irx_D] [5irx_E] [5irx_F]
  • SWISS-PROT database:
  • Domain found in 5IRX: [ANK ] by SMART

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