5J5D		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	6GT, NA	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Inhibition of Mycobacterium tuberculosis dihydrodipicolinate synthase by alpha-ketopimelic acid and its other structural analogues., Shrivastava P, Navratna V, Silla Y, Dewangan RP, Pramanik A, Chaudhary S, Rayasam G, Kumar A, Gopal B, Ramachandran S, Sci Rep. 2016 Aug 9;6:30827. doi: 10.1038/srep30827. PMID:27501775

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk] Biological Unit Coordinates (5j5d.pdb1.gz) 360 Kb LPC: Ligand-Protein Contacts for 5J5D CSU: Contacts of Structural Units for 5J5D Structure Factors (251 Kb) Retrieve 5J5D in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5J5D from S2C, [Save to disk] Re-refined 5j5d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5J5D in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5j5d] [5j5d_A] SWISS-PROT database: Domain found in 5J5D: [DHDPS ] by SMART

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