5JB3 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 5MU, GNP, H2U, MET, MG, OMC, PSU, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
1


3
  • ribonuclease P activity


    • 6


    7
  • translation elongation facto...


    • 8


    9


    A


    B


    D


    E


    F


    G


    H


    I


    J


    K


    L


    M


    N


    O


    P


    Q


    R


    S


    T


    U


    V


    W


    X


    Y


    Z


    Primary referenceCryo-EM study of start codon selection during archaeal translation initiation., Coureux PD, Lazennec-Schurdevin C, Monestier A, Larquet E, Cladiere L, Klaholz BP, Schmitt E, Mechulam Y, Nat Commun. 2016 Nov 7;7:13366. doi: 10.1038/ncomms13366. PMID:27819266
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1183 Kb) [Save to disk]
  • Biological Unit Coordinates (5jb3.pdb1.gz) 1171 Kb
  • LPC: Ligand-Protein Contacts for 5JB3
  • CSU: Contacts of Structural Units for 5JB3
  • Retrieve 5JB3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5JB3 from S2C, [Save to disk]
    • View 5JB3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5jb3_A] [5jb3_B] [5jb3_C] [5jb3_D] [5jb3_E] [5jb3_F] [5jb3_G] [5jb3_H] [5jb3] [5jb3_0] [5jb3_1] [5jb3_2] [5jb3_3] [5jb3_4] [5jb3_5] [5jb3_6] [5jb3_7] [5jb3_8] [5jb3_9] [5jb3_I] [5jb3_J] [5jb3_K] [5jb3_L] [5jb3_M] [5jb3_N] [5jb3_O] [5jb3_P] [5jb3_Q] [5jb3_R] [5jb3_S] [5jb3_T] [5jb3_U] [5jb3_V] [5jb3_W] [5jb3_X] [5jb3_Y] [5jb3_Z]
  • SWISS-PROT database:
  • Domains found in 5JB3: [KH] [KOW] [Ribosomal_S10] [Ribosomal_S13_N] [Ribosomal_S15] [Ribosomal_S19e] [Ribosomal_S27] [Ribosomal_S3Ae] [Ribosomal_S4] [Ribosomal_S6e] [S1] [S4] [eIF1a] [eIF2B_5 ] by SMART

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