OCA Atlas for 5JSB

5JSB

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
E, C, G, A, I, K

Primary reference

Computationally designed high specificity inhibitors delineate the roles of BCL2 family proteins in cancer., Berger S, Procko E, Margineantu D, Lee EF, Shen BW, Zelter A, Silva DA, Chawla K, Herold MJ, Garnier JM, Johnson R, MacCoss MJ, Lessene G, Davis TN, Stayton PS, Stoddard BL, Fairlie WD, Hockenbery DM, Baker D, Elife. 2016 Nov 2;5. pii: e20352. doi: 10.7554/eLife.20352. PMID:27805565

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (560 Kb) [Save to disk]

Biological Unit Coordinates (5jsb.pdb1.gz) 94 Kb

Biological Unit Coordinates (5jsb.pdb2.gz) 94 Kb

Biological Unit Coordinates (5jsb.pdb3.gz) 94 Kb

Biological Unit Coordinates (5jsb.pdb4.gz) 94 Kb

Biological Unit Coordinates (5jsb.pdb5.gz) 94 Kb

Biological Unit Coordinates (5jsb.pdb6.gz) 94 Kb

CSU: Contacts of Structural Units for 5JSB

Structure Factors (775 Kb)

Retrieve 5JSB in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5JSB from S2C, [Save to disk]

Re-refined 5jsb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5JSB in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5jsb_H] [5jsb] [5jsb_A] [5jsb_B] [5jsb_C] [5jsb_D] [5jsb_E] [5jsb_F] [5jsb_G] [5jsb_I] [5jsb_J] [5jsb_K] [5jsb_L]

SWISS-PROT database:

Domain found in 5JSB: [BCL ] by SMART

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