5JVK	Hydrolase	date	May 11, 2016
title	Structural Insights Into A Family 39 Glycoside Hydrolase Fro Symbiont Bacteroides Cellulosilyticus Wh2.
authors	A.Ali-Ahmad, M.L.Garron, V.Zamboni, N.Lenfant, Y.Bourne, F.Vincen
compound		source
Molecule: Uncharacterized Protein Chain: A, B, C Engineered: Yes		Organism_scientific: Bacteroides Cellulosilyticus Organism_taxid: 246787 Gene: Bcellwh2_03314 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_variant: Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pdest17
symmetry	Space Group: P 31 2 1	R_factor 0.206 R_Free 0.241
crystal cell	length a length b length c angle alpha angle beta angle gamma 157.540 157.540 155.644 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	CXS, GOL, SO4	enzyme
Gene	BCELLWH2
Primary reference	Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2., Ali-Ahmad A, Garron ML, Zamboni V, Lenfant N, Nurizzo D, Henrissat B, Berrin JG, Bourne Y, Vincent F, J Struct Biol. 2016 Nov 24. pii: S1047-8477(16)30245-3. doi:, 10.1016/j.jsb.2016.11.004. PMID:27890857

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (252 Kb) [Save to disk] Biological Unit Coordinates (5jvk.pdb1.gz) 85 Kb Biological Unit Coordinates (5jvk.pdb2.gz) 84 Kb Biological Unit Coordinates (5jvk.pdb3.gz) 86 Kb LPC: Ligand-Protein Contacts for 5JVK CSU: Contacts of Structural Units for 5JVK Structure Factors (1037 Kb) Retrieve 5JVK in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5JVK from S2C, [Save to disk] Re-refined 5jvk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5JVK in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5JVK

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5jvk_B] [5jvk] [5jvk_C] [5jvk_A] SWISS-PROT database: Domain organization of by SWISSPFAM

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