5JXY		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	UF2	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Structural basis of damage recognition by thymine DNA glycosylase: Key roles for N-terminal residues., Coey CT, Malik SS, Pidugu LS, Varney KM, Pozharski E, Drohat AC, Nucleic Acids Res. 2016 Aug 31. pii: gkw768. PMID:27580719

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (120 Kb) [Save to disk] Biological Unit Coordinates (5jxy.pdb1.gz) 115 Kb LPC: Ligand-Protein Contacts for 5JXY CSU: Contacts of Structural Units for 5JXY Structure Factors (2686 Kb) Retrieve 5JXY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5JXY from S2C, [Save to disk] Re-refined 5jxy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5JXY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5jxy_C] [5jxy_A] [5jxy_D] [5jxy] SWISS-PROT database: Domains found in 5JXY: [UDG] [UreE_C ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---