5K8K date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ACT, GOL, LP5, MN, MSE enzyme
Gene HI
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the essential Haemophilus influenzae UDP-diacylglucosamine pyrophosphohydrolase LpxH in lipid A biosynthesis., Cho J, Lee CJ, Zhao J, Young HE, Zhou P, Nat Microbiol. 2016 Aug 15;1(11):16154. doi: 10.1038/nmicrobiol.2016.154. PMID:27780190
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (5k8k.pdb1.gz) 82 Kb
  • LPC: Ligand-Protein Contacts for 5K8K
  • CSU: Contacts of Structural Units for 5K8K
  • Structure Factors (160 Kb)
  • Retrieve 5K8K in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5K8K from S2C, [Save to disk]
  • Re-refined 5k8k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5K8K in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5k8k] [5k8k_A]
  • SWISS-PROT database:

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