5KHD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	C2E	enzyme
Gene	SVEN
Gene Ontology	Chain Function Process Component A, R
Primary reference	Tetrameric c-di-GMP mediates effective transcription factor dimerization to control Streptomyces development., Tschowri N, Schumacher MA, Schlimpert S, Chinnam NB, Findlay KC, Brennan RG, Buttner MJ, Cell. 2014 Aug 28;158(5):1136-47. doi: 10.1016/j.cell.2014.07.022. PMID:25171413

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk] Biological Unit Coordinates (5khd.pdb1.gz) 75 Kb LPC: Ligand-Protein Contacts for 5KHD CSU: Contacts of Structural Units for 5KHD Structure Factors (141 Kb) Retrieve 5KHD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5KHD from S2C, [Save to disk] Re-refined 5khd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5KHD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5khd] [5khd_A] [5khd_R] SWISS-PROT database:

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