OCA Atlas for 5L3S

5L3S

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

G, GNP, GOL, MG, SO4

enzyme

Gene

SACI

Gene
Ontology

Chain	Function	Process	Component
A, C, E, G
H, D, F, B

Primary reference

Structural Basis for Conserved Regulation and Adaptation of the Signal Recognition Particle Targeting Complex., Wild K, Bange G, Motiejunas D, Kribelbauer J, Hendricks A, Segnitz B, Wade RC, Sinning I, J Mol Biol. 2016 May 27. pii: S0022-2836(16)30184-X. doi:, 10.1016/j.jmb.2016.05.015. PMID:27241309

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (762 Kb) [Save to disk]

Biological Unit Coordinates (5l3s.pdb1.gz) 195 Kb

Biological Unit Coordinates (5l3s.pdb2.gz) 189 Kb

Biological Unit Coordinates (5l3s.pdb3.gz) 194 Kb

Biological Unit Coordinates (5l3s.pdb4.gz) 193 Kb

LPC: Ligand-Protein Contacts for 5L3S

CSU: Contacts of Structural Units for 5L3S

Structure Factors (3744 Kb)

Retrieve 5L3S in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5L3S from S2C, [Save to disk]

Re-refined 5l3s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5L3S in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5l3s] [5l3s_A] [5l3s_B] [5l3s_C] [5l3s_D] [5l3s_E] [5l3s_F] [5l3s_G] [5l3s_H]

SWISS-PROT database:

Domains found in 5L3S: [AAA] [SRP54] [SRP54_N ] by SMART

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