5MDH date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MAK, NAD enzyme
note 5MDH (Molecule of the Month:pdb154)
related structures by homologous chain: 4MDH
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural basis of substrate specificity in malate dehydrogenases: crystal structure of a ternary complex of porcine cytoplasmic malate dehydrogenase, alpha-ketomalonate and tetrahydoNAD., Chapman AD, Cortes A, Dafforn TR, Clarke AR, Brady RL, J Mol Biol 1999 Jan 15;285(2):703-12. PMID:10075524
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (117 Kb) [Save to disk]
  • Biological Unit Coordinates (5mdh.pdb1.gz) 111 Kb
  • LPC: Ligand-Protein Contacts for 5MDH
  • CSU: Contacts of Structural Units for 5MDH
  • Likely Quarternary Molecular Structure file(s) for 5MDH
  • Retrieve 5MDH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5MDH from S2C, [Save to disk]
  • View 5MDH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5mdh] [5mdh_A] [5mdh_B]
  • SWISS-PROT database: [P11708]

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science