5MDL date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, F3S, F4S, MG, NFV, O, OXY, PEG, SF4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
L


S


Primary referenceTracking the route of molecular oxygen in O2-tolerant membrane-bound [NiFe] hydrogenase., Kalms J, Schmidt A, Frielingsdorf S, Utesch T, Gotthard G, von Stetten D, van der Linden P, Royant A, Mroginski MA, Carpentier P, Lenz O, Scheerer P, Proc Natl Acad Sci U S A. 2018 Mar 6;115(10):E2229-E2237. doi:, 10.1073/pnas.1712267115. Epub 2018 Feb 20. PMID:29463722
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (303 Kb) [Save to disk]
  • Biological Unit Coordinates (5mdl.pdb1.gz) 296 Kb
  • LPC: Ligand-Protein Contacts for 5MDL
  • CSU: Contacts of Structural Units for 5MDL
  • Structure Factors (6672 Kb)
  • Retrieve 5MDL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5MDL from S2C, [Save to disk]
  • View 5MDL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5mdl_L] [5mdl_S]
  • SWISS-PROT database:

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