5MZ4 Viral Protein date Jan 30, 2017
title Crystal Structure Of Full-Lengh Csfv Ns34a
authors M.A.Tortorici, F.A.Rey
compound source
Molecule: Genome Polyprotein,Genome Polyprotein
Chain: A, B
Fragment: Unp Residues 2293-2329,Unp Residues 1590-2280
Ec: 3.4.22.-,3.4.21.113,3.6.1.15,3.6.4.13,2.7.7.48,3.4.22.- 3.4.21.113,3.6.1.15,3.6.4.13,2.7.7.48;
Engineered: Yes
Mutation: Yes
 Organism_scientific: Classical Swine Fever Virus (Strain Al
Organism_common: Csfv
Organism_taxid: 11097
Strain: Alfort
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 2
R_factor 0.193 R_Free 0.233
crystal
cell
length a length b length c angle alpha angle beta angle gamma
127.211 168.839 98.495 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.05 Å
ligand
enzyme Hydrolase E.C.3.4.22 BRENDA
note 5MZ4 supersedes 5LKL
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (458 Kb) [Save to disk]
  • Biological Unit Coordinates (5mz4.pdb1.gz) 452 Kb
  • CSU: Contacts of Structural Units for 5MZ4
  • Structure Factors (687 Kb)
  • Retrieve 5MZ4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5MZ4 from S2C, [Save to disk]
  • Re-refined 5mz4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5MZ4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5MZ4
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5mz4_A] [5mz4] [5mz4_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5MZ4
  • Community annotation for 5MZ4 at PDBWiki (http://pdbwiki.org)

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