5N6U	Hydrolase	date	Feb 16, 2017
title	Crystal Structure Of Beta-D-Mannosidase From Dictyoglomus Thermophilum.
authors	N.Richet, P.Lafite
compound		source
Molecule: Beta-Mannosidase Chain: A, B, C, D Ec: 3.2.1.25 Engineered: Yes		Organism_scientific: Dictyoglomus Thermophilum H-6-12 Organism_taxid: 309799 Gene: Dicth_1692 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.204 R_Free 0.255
crystal cell	length a length b length c angle alpha angle beta angle gamma 139.250 75.560 217.880 90.00 92.52 90.00
method	X-Ray Diffraction	resolution	3.08 Å
ligand	BMA	enzyme	Hydrolase E.C.3.2.1.25 BRENDA
Gene	DICTH
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Is the acid/base catalytic residue mutation in beta-D-mannosidase DtMan from Dictyoglomus thermophilum sufficient enough to provide thioglycoligase activity?, Guillotin L, Richet N, Lafite P, Daniellou R, Biochimie. 2017 Apr 3. pii: S0300-9084(17)30085-8. doi:, 10.1016/j.biochi.2017.03.020. PMID:28385558

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (549 Kb) [Save to disk] Biological Unit Coordinates (5n6u.pdb1.gz) 274 Kb Biological Unit Coordinates (5n6u.pdb2.gz) 275 Kb LPC: Ligand-Protein Contacts for 5N6U CSU: Contacts of Structural Units for 5N6U Structure Factors (766 Kb) Retrieve 5N6U in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5N6U from S2C, [Save to disk] Re-refined 5n6u structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5N6U in 3D

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Visual 3D analysis of 5N6U

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5n6u_A] [5n6u_B] [5n6u] [5n6u_C] [5n6u_D] SWISS-PROT database: Domain organization of by SWISSPFAM

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