5NDF		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	EDO, LU2, MN, UDP	enzyme
Gene Ontology	Chain Function Process Component B, C, D, E, A, F
Primary reference	The small molecule luteolin inhibits N-acetyl-alpha-galactosaminyltransferases and reduces mucin-type O-glycosylation of amyloid precursor protein., Liu F, Xu K, Xu Z, Rivas ML, Li X, Lu J, Delso I, Merino P, Hurtado-Guerrero R, Zhang Y, J Biol Chem. 2017 Oct 23. pii: jbc.M117.814202. doi: 10.1074/jbc.M117.814202. PMID:29061849

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (507 Kb) [Save to disk] Biological Unit Coordinates (5ndf.pdb1.gz) 171 Kb Biological Unit Coordinates (5ndf.pdb2.gz) 170 Kb Biological Unit Coordinates (5ndf.pdb3.gz) 172 Kb Biological Unit Coordinates (5ndf.pdb4.gz) 171 Kb Biological Unit Coordinates (5ndf.pdb5.gz) 170 Kb LPC: Ligand-Protein Contacts for 5NDF CSU: Contacts of Structural Units for 5NDF Structure Factors (6841 Kb) Retrieve 5NDF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5NDF from S2C, [Save to disk]

View 5NDF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ndf_A] [5ndf_B] [5ndf_C] [5ndf_D] [5ndf_E] [5ndf_F] SWISS-PROT database:

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