OCA Atlas for 5OKM

5OKM

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

B3P, EDO, NO3

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, C, A, F, D, E, H, G

Primary reference

Structural basis for interdomain communication in SHIP2 providing high phosphatase activity., Le Coq J, Camacho-Artacho M, Velazquez JV, Santiveri CM, Gallego LH, Campos-Olivas R, Dolker N, Lietha D, Elife. 2017 Aug 9;6. pii: e26640. doi: 10.7554/eLife.26640. PMID:28792888

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1180 Kb) [Save to disk]

Biological Unit Coordinates (5okm.pdb1.gz) 153 Kb

Biological Unit Coordinates (5okm.pdb2.gz) 155 Kb

Biological Unit Coordinates (5okm.pdb3.gz) 152 Kb

Biological Unit Coordinates (5okm.pdb4.gz) 155 Kb

Biological Unit Coordinates (5okm.pdb5.gz) 154 Kb

Biological Unit Coordinates (5okm.pdb6.gz) 152 Kb

Biological Unit Coordinates (5okm.pdb7.gz) 152 Kb

Biological Unit Coordinates (5okm.pdb8.gz) 151 Kb

LPC: Ligand-Protein Contacts for 5OKM

CSU: Contacts of Structural Units for 5OKM

Structure Factors (8696 Kb)

Retrieve 5OKM in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5OKM from S2C, [Save to disk]

View 5OKM in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5okm_A] [5okm_B] [5okm_C] [5okm_D] [5okm_E] [5okm_F] [5okm_G] [5okm_H]

SWISS-PROT database:

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