OCA Atlas for 5TRM

5TRM

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
B, A, N, I, F, P, M, O, X, E, J, G, T, V, W, U, R, S, D, C, L, K, Q, H

Primary reference

KAT2A coupled with the alpha-KGDH complex acts as a histone H3 succinyltransferase., Wang Y, Guo YR, Liu K, Yin Z, Liu R, Xia Y, Tan L, Yang P, Lee JH, Li XJ, Hawke D, Zheng Y, Qian X, Lyu J, He J, Xing D, Tao YJ, Lu Z, Nature. 2017 Dec 14;552(7684):273-277. doi: 10.1038/nature25003. Epub 2017 Dec 6. PMID:29211711

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (635 Kb) [Save to disk]

Biological Unit Coordinates (5trm.pdb1.gz) 628 Kb

CSU: Contacts of Structural Units for 5TRM

Structure Factors (763 Kb)

Retrieve 5TRM in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5TRM from S2C, [Save to disk]

View 5TRM in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5trm_A] [5trm_B] [5trm_C] [5trm_D] [5trm_E] [5trm_F] [5trm_G] [5trm_H] [5trm_I] [5trm_J] [5trm_K] [5trm_L] [5trm_M] [5trm_N] [5trm_O] [5trm_P] [5trm_Q] [5trm_R] [5trm_S] [5trm_T] [5trm_U] [5trm_V] [5trm_W] [5trm_X]

SWISS-PROT database:

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