5TZD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	C2E	enzyme
Gene	SVEN
Gene Ontology	Chain Function Process Component B, A, C, J
Primary reference	The Streptomyces master regulator BldD binds c-di-GMP sequentially to create a functional BldD2-(c-di-GMP)4 complex., Schumacher MA, Zeng W, Findlay KC, Buttner MJ, Brennan RG, Tschowri N, Nucleic Acids Res. 2017 Apr 26. doi: 10.1093/nar/gkx287. PMID:28449057

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (160 Kb) [Save to disk] Biological Unit Coordinates (5tzd.pdb1.gz) 42 Kb Biological Unit Coordinates (5tzd.pdb2.gz) 38 Kb Biological Unit Coordinates (5tzd.pdb3.gz) 40 Kb Biological Unit Coordinates (5tzd.pdb4.gz) 37 Kb LPC: Ligand-Protein Contacts for 5TZD CSU: Contacts of Structural Units for 5TZD Structure Factors (249 Kb) Retrieve 5TZD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5TZD from S2C, [Save to disk] Re-refined 5tzd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5TZD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5tzd] [5tzd_A] [5tzd_B] [5tzd_C] [5tzd_J] SWISS-PROT database:

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