5TZF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand C2E enzyme
Gene SVEN
Gene
Ontology
ChainFunctionProcessComponent
E, M, N, B, J, H, D, I


Primary referenceThe Streptomyces master regulator BldD binds c-di-GMP sequentially to create a functional BldD2-(c-di-GMP)4 complex., Schumacher MA, Zeng W, Findlay KC, Buttner MJ, Brennan RG, Tschowri N, Nucleic Acids Res. 2017 Apr 26. doi: 10.1093/nar/gkx287. PMID:28449057
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (224 Kb) [Save to disk]
  • Biological Unit Coordinates (5tzf.pdb1.gz) 28 Kb
  • Biological Unit Coordinates (5tzf.pdb2.gz) 29 Kb
  • Biological Unit Coordinates (5tzf.pdb3.gz) 29 Kb
  • Biological Unit Coordinates (5tzf.pdb4.gz) 29 Kb
  • Biological Unit Coordinates (5tzf.pdb5.gz) 30 Kb
  • Biological Unit Coordinates (5tzf.pdb6.gz) 29 Kb
  • Biological Unit Coordinates (5tzf.pdb7.gz) 28 Kb
  • Biological Unit Coordinates (5tzf.pdb8.gz) 30 Kb
  • LPC: Ligand-Protein Contacts for 5TZF
  • CSU: Contacts of Structural Units for 5TZF
  • Structure Factors (318 Kb)
  • Retrieve 5TZF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5TZF from S2C, [Save to disk]
  • Re-refined 5tzf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5TZF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5tzf] [5tzf_B] [5tzf_D] [5tzf_E] [5tzf_H] [5tzf_I] [5tzf_J] [5tzf_M] [5tzf_N]
  • SWISS-PROT database:

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