5U4J | Ribosome | date | Dec 04, 2016 |
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title | Structural Basis Of Co-Translational Quality Control By Arfa Bound To Ribosome | ||||||||||||||||||||||||||||||
authors | F.Zeng, Y.Chen, J.Remis, M.Shekhar, J.C.Phillips, E.Tajkhorshid, H | ||||||||||||||||||||||||||||||
compound | source | ||||||||||||||||||||||||||||||
Molecule: 16s Rrna Chain: a |
Organism_scientific: Escherichia Coli Organism_taxid: 562 Strain: Mre600 | ||||||||||||||||||||||||||||||
Molecule: 23s Rrna Chain: A |
Organism_scientific: Escherichia Coli Organism_taxid: 562 Strain: Mre600 | ||||||||||||||||||||||||||||||
Molecule: 30s Ribosomal Protein S3 Chain: c Other_details: Gene Name(S): Rpsc B3314 Jw3276 |
Organism_scientific: Escherichia Coli Organism_taxid: 562 Strain: Mre600 | ||||||||||||||||||||||||||||||
Molecule: 30s Ribosomal Protein S4 Chain: d Other_details: Gene Name(S): Rpsd Rama B3296 Jw3258 |
Organism_scientific: Escherichia Coli Organism_taxid: 562 Strain: Mre600 | ||||||||||||||||||||||||||||||
Molecule: 30s Ribosomal Protein S5 Chain: e Other_details: Gene Name(S): Rpse Spc B3303 Jw3265 |
Organism_scientific: Escherichia Coli Organism_taxid: 562 Strain: Mre600 | ||||||||||||||||||||||||||||||
Molecule: Mrna Chain: z Engineered: Yes |
Synthetic: Yes Organism_scientific: Escherichia Coli Organism_taxid: 562 | ||||||||||||||||||||||||||||||
Molecule: P-Site Trna Fmet Chain: x Engineered: Yes |
Synthetic: Yes Organism_scientific: Escherichia Coli Organism_taxid: 562 Other_details: Rna Was Prepared By In Vitro Transcription | ||||||||||||||||||||||||||||||
Molecule: 30s Ribosomal Protein S12 Chain: l Other_details: Gene Name(S): Rpsl Stra B3342 Jw3304 |
Organism_scientific: Escherichia Coli Organism_taxid: 562 Strain: Mre600 | ||||||||||||||||||||||||||||||
Molecule: Peptide Chain Release Factor 2 Chain: v Synonym: Rf-2 Engineered: Yes Other_details: Gene Name(S): Prfb Eck2886 Jw5847 Supk |
Organism_scientific: Escherichia Coli Organism_taxid: 562 Strain: Mre600 Gene: Prfb, Supk, B2891, Jw5847 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||
Molecule: Alternative Ribosome-Rescue Factor A Chain: w Engineered: Yes Other_details: Gene Name(S): Arfa Eck3278 Jw3253 Yhdl |
Organism_scientific: Escherichia Coli Organism_taxid: 562 Strain: Mre600 Gene: Arfa, Yhdl, B4550, Jw3253 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||||||||||||||
symmetry | Space Group: P 1 |
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crystal cell |
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method | Electron Microscopy | resolution | 3.70 Å | ||||||||||||||||||||||||||||
ligand | 2MG, 4OC, 5MC, G7M, MA6, PSU, UR3 | enzyme |
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Gene Ontology |
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Primary reference | Structural basis of co-translational quality control by ArfA and RF2 bound to ribosome., Zeng F, Chen Y, Remis J, Shekhar M, Phillips JC, Tajkhorshid E, Jin H, Nature. 2017 Jan 11. doi: 10.1038/nature21053. PMID:28077875 |
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OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |