5UM6 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 8E7, 8EA, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDomain alternation and active site remodeling are conserved structural features of ubiquitin E1., Lv Z, Yuan L, Atkison JH, Aldana-Masangkay G, Chen Y, Olsen SK, J Biol Chem. 2017 Jul 21;292(29):12089-12099. doi: 10.1074/jbc.M117.787622. Epub , 2017 Jun 1. PMID:28572513
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (272 Kb) [Save to disk]
  • Biological Unit Coordinates (5um6.pdb1.gz) 267 Kb
  • LPC: Ligand-Protein Contacts for 5UM6
  • CSU: Contacts of Structural Units for 5UM6
  • Structure Factors (211 Kb)
  • Retrieve 5UM6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5UM6 from S2C, [Save to disk]
  • Re-refined 5um6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5UM6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5um6_A]
  • SWISS-PROT database:

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