5V4M date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FUC, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, J, D, G


I, L, C, F


Primary referenceDominant protection from HLA-linked autoimmunity by antigen-specific regulatory T cells., Ooi JD, Petersen J, Tan YH, Huynh M, Willett ZJ, Ramarathinam SH, Eggenhuizen PJ, Loh KL, Watson KA, Gan PY, Alikhan MA, Dudek NL, Handel A, Hudson BG, Fugger L, Power DA, Holt SG, Coates PT, Gregersen JW, Purcell AW, Holdsworth SR, La Gruta NL, Reid HH, Rossjohn J, Kitching AR, Nature. 2017 May 11;545(7653):243-247. doi: 10.1038/nature22329. Epub 2017 May 3. PMID:28467828
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (535 Kb) [Save to disk]
  • Biological Unit Coordinates (5v4m.pdb1.gz) 136 Kb
  • Biological Unit Coordinates (5v4m.pdb2.gz) 135 Kb
  • Biological Unit Coordinates (5v4m.pdb3.gz) 136 Kb
  • Biological Unit Coordinates (5v4m.pdb4.gz) 135 Kb
  • LPC: Ligand-Protein Contacts for 5V4M
  • CSU: Contacts of Structural Units for 5V4M
  • Structure Factors (3031 Kb)
  • Retrieve 5V4M in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5V4M from S2C, [Save to disk]
  • Re-refined 5v4m structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5V4M in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5v4m_A] [5v4m_C] [5v4m_D] [5v4m_F] [5v4m_G] [5v4m_I] [5v4m_J] [5v4m_L] [5v4m]
  • SWISS-PROT database:

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