5V5X date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BMA, CA, FUC, MAN, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, C, B, A


Primary referenceProtocadherin cis-dimer architecture and recognition unit diversity., Goodman KM, Rubinstein R, Dan H, Bahna F, Mannepalli S, Ahlsen G, Aye Thu C, Sampogna RV, Maniatis T, Honig B, Shapiro L, Proc Natl Acad Sci U S A. 2017 Oct 30. pii: 201713449. doi:, 10.1073/pnas.1713449114. PMID:29087338
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (566 Kb) [Save to disk]
  • Biological Unit Coordinates (5v5x.pdb1.gz) 551 Kb
  • LPC: Ligand-Protein Contacts for 5V5X
  • CSU: Contacts of Structural Units for 5V5X
  • Structure Factors (1011 Kb)
  • Retrieve 5V5X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5V5X from S2C, [Save to disk]
  • View 5V5X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5v5x_A] [5v5x_B] [5v5x_C] [5v5x_D]
  • SWISS-PROT database:

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