5V8U date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 90M, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceSmall molecule metalloprotease inhibitor with in vitro, ex vivo and in vivo efficacy against botulinum neurotoxin serotype A., Jacobson AR, Adler M, Silvaggi NR, Allen KN, Smith GM, Fredenburg RA, Stein RL, Park JB, Feng X, Shoemaker CB, Deshpande SS, Goodnough MC, Malizio CJ, Johnson EA, Pellett S, Tepp WH, Tzipori S, Toxicon. 2017 Jul 8;137:36-47. doi: 10.1016/j.toxicon.2017.06.016. PMID:28698055
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (388 Kb) [Save to disk]
  • Biological Unit Coordinates (5v8u.pdb1.gz) 193 Kb
  • Biological Unit Coordinates (5v8u.pdb2.gz) 191 Kb
  • LPC: Ligand-Protein Contacts for 5V8U
  • CSU: Contacts of Structural Units for 5V8U
  • Structure Factors (671 Kb)
  • Retrieve 5V8U in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5V8U from S2C, [Save to disk]
  • Re-refined 5v8u structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5V8U in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5v8u_A] [5v8u_B]
  • SWISS-PROT database:

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