5V8W	Hydrolase	date	Mar 22, 2017
title	Crystal Structure Of Human Integrator Ints9-Ints11 Ctd Compl
authors	Y.Wu, L.Tong
compound		source
Molecule: Integrator Complex Subunit 9 Chain: A, C, E, G Fragment: C-Terminal Domain (Unp Residues 582-658) Synonym: Int9,Protein Related To Cpsf Subunits Of 74 Kda,Rc Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ints9, Rc74 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Integrator Complex Subunit 11 Chain: B, D, F, H Fragment: C-Terminal Domain (Unp Residues 491-600) Synonym: Int11,Cleavage And Polyadenylation-Specific Factor Protein,Cpsf3-Like Protein,Protein Related To Cpsf Subunits Kda,Rc-68; Ec: 3.1.27.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Cpsf3l, Ints11, Rc68 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.167 R_Free 0.220
crystal cell	length a length b length c angle alpha angle beta angle gamma 63.010 67.780 98.585 90.00 100.65 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand		enzyme	Hydrolase E.C.3.1.27 BRENDA
Gene Ontology	Chain Function Process Component A, C, G, E
Primary reference	Molecular basis for the interaction between Integrator subunits IntS9 and IntS11 and its functional importance., Wu Y, Albrecht TR, Baillat D, Wagner EJ, Tong L, Proc Natl Acad Sci U S A. 2017 Apr 25;114(17):4394-4399. doi:, 10.1073/pnas.1616605114. Epub 2017 Apr 10. PMID:28396433

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (256 Kb) [Save to disk] Biological Unit Coordinates (5v8w.pdb1.gz) 64 Kb Biological Unit Coordinates (5v8w.pdb2.gz) 64 Kb Biological Unit Coordinates (5v8w.pdb3.gz) 59 Kb Biological Unit Coordinates (5v8w.pdb4.gz) 65 Kb CSU: Contacts of Structural Units for 5V8W Structure Factors (976 Kb) Retrieve 5V8W in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5V8W from S2C, [Save to disk] Re-refined 5v8w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5V8W in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5V8W

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5v8w_B] [5v8w_A] [5v8w] [5v8w_F] [5v8w_G] [5v8w_H] [5v8w_D] [5v8w_C] [5v8w_E] SWISS-PROT database: Domain organization of by SWISSPFAM

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