5VF1 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MEA, ORN, PHI enzyme
Primary referenceX-ray Crystallographic Structure of a Giant Double-Walled Peptide Nanotube Formed by a Macrocyclic beta-Sheet Containing Abeta16-22., Chen KH, Corro KA, Le SP, Nowick JS, J Am Chem Soc. 2017 Jun 21;139(24):8102-8105. doi: 10.1021/jacs.7b03890. Epub, 2017 Jun 13. PMID:28598147
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk]
  • Biological Unit Coordinates (5vf1.pdb1.gz) 1246 Kb
  • LPC: Ligand-Protein Contacts for 5VF1
  • CSU: Contacts of Structural Units for 5VF1
  • Structure Factors (206 Kb)
  • Retrieve 5VF1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VF1 from S2C, [Save to disk]
  • Re-refined 5vf1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5VF1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vf1_A] [5vf1_B] [5vf1_C] [5vf1_D] [5vf1_E] [5vf1_F]
  • SWISS-PROT database:

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